WebDec 3, 2024 · If we went back to the older way that queryResult.update(records) worked -- where we called it every time we received a partial, incremental batch of records -- we could potentially fail fast if the results exploded, not needing to wait to get all records from every endpoint before failing.. This would require changes to query_results.js and would … WebAlternatively, we can look at the NER score provided by Semmeddb in the PREDICATION_AUX table (as suggested in analysis of semmeddb using pubtator results biothings/BioThings_Explorer_TRAPI#501 (comment))
BioThings.io
WebDemotests will be broken on dev until it is able to use the new TRAPI 1.4 format, see this PR: biothings/biothings_explorer#612 WebBioThings Explorer is the "Google Maps" for biologists. It utilizes SmartAPI Specifications to build a network of APIs. And by traversing through the network, BioThings Explorer could help user identify potential paths … flower black background
Introduction — BioThings SDK documentation
WebBioThings Standalone This step-by-step guide shows how to use Biothings standalone instances. Standalone instances are based on Docker containers and provide a fully pre-configured, ready-to-use Biothings API that can easily be maintained and kept up-to-date. WebBioThings SDK uses MongoDB as the “staging” storage backend for JSON objects before they are sent to Elasticsearch for indexing. You must a have working MongoDB instance you can connect to. We’ll also perform some basic commands. You also have to install the latest stable BioThings SDK release, with pip from PyPI: pip install biothings WebA BD2K/Network-of-BioThings project. SmartAPI allows API publishers to annotate their services and input/output parameters in a structured and identifiable manner, based on a standard JSON-LD format for biomedical APIs and services. greek mythology in filipino